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NEMURO - Model description

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Model Name NEMURO - A Biogeochemical component coupled to CCSR COCO 3.4 hydrodynamics and NEMURO biogeochemistry
Summary NEMURO (North Pacific Ecosystem Model for Understanding Regional Oceanography) is a lower trophic level ecosystem model for the North Pacific Ocean.

NEMURO is a biomass-based Nitogen model that simulates the temporal evolution and dynamics of the North Pacific’s nutrient–phytoplankton–zooplankton food web. Different spatial implementations exist, including a single well-mixed domain that represents the surface layer of the water column (Kishi et al., 2006-a), a 1D vertically structured formulation (Fujii et al., 2006), a 2D cross-shelf formulation (Wainright et al., 2006), and a fully 3D spatially-explicit basin-scale implementation (Aita et al., 2006).

NEMURO is oupled to Center for Climate System Research (CCSR) Ocean Component Model (COCO Version 3.4) developed at CCSR, University of Tokyo (Hasumi, 2000, 2002). The horizontal resolution is one degree in both latitude and longitude and there are 54 vertical levels (same as Aita et al., 2003). There are 20 levels in the vertical each 5m thick within the upper 100 m, and 10m thick between 100m and 200 m.

Aita, M.N., Yamanaka, Y., Kishi M.J., 2006. Interdecadal variation of the lower trophic ecosystem in the North Pacific between 1948 and 2002, in a 3-D implementation of the NEMURO model. Ecol. Modell., doi:10.1016/j.ecolmodel.2006.07.045.

Fujii, M., Yamanaka, Y., Nojiri, Y., Kishi, M.J., Chai, F., 2006. Comparison of seasonal characteristics in biogeochemistry among the subarctic North Pacific stations described with a
NEMURO-based marine ecosystem model. Ecol. Modell., doi:10.1016/j.ecolmodel.2006.02.046.

Kishi, M.J. et al., 2006-a. NEMURO—a lower trophic level model for the North Pacific marine ecosystem. Ecol. Modell., doi:10.1016/j.ecolmodel.2006.08.021.

Wainright, T., Feinberg, L.R., Hooff, R.C., Peterson, W.T., 2006. A comparison of two lower trophic models for the california current system. Ecol. Modell., doi:10.1016/j.ecolmodel.2006.06.019.
Developer contact KISHI Michio - Faculty of Fisheries Sciences, Hokkaido Univ. 2
Model Focus Organic Production. () Trophic level coupling ()
References
[NEMURO.jpg]

Application to

EO System Applied to , , Mediterranean + Black Seas
Trophic Level of Focus phytoplankton
Functional groups TL 4:
TL 3:
TL 2: microzoo (ZS), mesozoo (ZL), genatinous zooplankton (ZP)
TL 1: Diatoms (PL), nanoflagellates (PS)
TL 0: NH4, NO3, DON, PON, Si(OH)4, Opal

Other informations

Software Environment
Hydrodynamics provided by CCSR COCO 3.4
Approach Eulerian
Life Mobility
Dimension 1D, 2D, 3D
Run step Day
Run period Year, Decade

Data Needs:

Data Needs:

Downloads and external links

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